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  4. Kulakovskiy, Ivan V; Vorontsov, Ilya E; Yevshin, Ivan S; Sharipov, Ruslan N; Fedorova, Alla D; Rumynskiy, Eugene I; Medvedeva, Yulia A; Magana-Mora, Arturo; Bajic, Vladimir B; Papatsenko, Dmitry A; Kolpakov, Fedor A; Makeev, Vsevolod J

    HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis

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    Oxford University Press (OUP), 2018

    Published in: Nucleic Acids Research

  5. Vorontsov, Ilya E; Eliseeva, Irina A; Zinkevich, Arsenii; Nikonov, Mikhail; Abramov, Sergey; Boytsov, Alexandr; Kamenets, Vasily; Kasianova, Alexandra; Kolmykov, Semyon; Yevshin, Ivan S; Favorov, Alexander; Medvedeva, Yulia A; Jolma, Arttu; Kolpakov, Fedor; Makeev, Vsevolod J; Kulakovskiy, Ivan V

    HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors

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    Oxford University Press (OUP), 2024

    Published in: Nucleic Acids Research

  6. Kulakovskiy, Ivan V.; Vorontsov, Ilya E.; Yevshin, Ivan S.; Soboleva, Anastasiia V.; Kasianov, Artem S.; Ashoor, Haitham; Ba-alawi, Wail; Bajic, Vladimir B.; Medvedeva, Yulia A.; Kolpakov, Fedor A.; Makeev, Vsevolod J.

    HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models

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    Oxford University Press (OUP), 2016

    Published in: Nucleic Acids Research

  7. Boytsov, Alexandr; Abramov, Sergey; Aiusheeva, Ariuna Z; Kasianova, Alexandra M; Baulin, Eugene; Kuznetsov, Ivan A; Aulchenko, Yurii S; Kolmykov, Semyon; Yevshin, Ivan; Kolpakov, Fedor; Vorontsov, Ilya E; Makeev, Vsevolod J; Kulakovskiy, Ivan V

    ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs

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    Oxford University Press (OUP), 2022

    Published in: Nucleic Acids Research